Background
Neural Stem Cells
Stem cells can be manufactured for human use for the first time in Ireland, following Irish Medicines Board licensing of a new facility in Galway.

NUI Galway’s Centre for Cell Manufacturing Ireland aims to culture adult stem cells to tackle conditions such as arthritis, heart disease, diabetes and associated conditions.

The centre, which is one of less than half a dozen in Europe authorised for stem cell manufacture, has been developed by researchers at NUIG’s regenerative medicine institute.

Stem cells serve as the body’s repair mechanism. They can be isolated from tissues such as bone marrow and fat, and cultured in laboratory settings.

More controversially, embryonic stem cells have been highly valued for their ability to turn into any type of cell in the body, but scientists can now use reprogrammed adult skin cells to create a stem cell that is very similar to embryonic versions.

The centre will be opened today by Minister of State for Research and Innovation Seán Sherlock, at a time when the Health Research Board and Science Foundation Ireland have approved funding there for clinical trials on using mesenchymal stem cells – cells that can differentiate into a variety of types – for treatment of critical limb ischemia, a condition associated with diabetes that can result in amputation.

The new centre’s director Prof Tim O’Brien explained that the stem cells must be grown in the laboratory to generate sufficient quantities, following their isolation from the bone marrow of adult donors, and the facility will help Ireland to develop therapies for a broad range of clinical problems which do not have effective treatments today.

“It will also allow us to translate discoveries from the basic stem cell research programme led by Prof Frank Barry at the Science Foundation Ireland-funded REMEDI to the clinic, and to be competitive for grant funding under the Horizon 2020 programme of the EU,” he said.

Stem cell research in Ireland is in what scientists have described as a “legislative lacuna”, but this relates to use of embryonic stem cells and does not in any way inhibit the use of adult stem cells, Prof O’Brien explained.

“We can only engage in clinical trials with clinical authorisation from the IMB and approval from the hospital ethics committee, and we are currently seeking such approval for clinical trials,”he said.

“The license to manufacture is an essential pre requisite to seek permission to undertake clinical trials. The license certificate must be included with the clinical trial authorisation application.”

NUIG president Dr Jim Browne said the centre develops Galway’s role as a “med tech hub of global standing”, while Irish Medical Devices Association board member John O’Dea has pointed to the lucrative revenue to be earned from regenerative medicine products, valued at about €1.3 billion in 2013 and with a 40 per cent sales growth last year.

Some 70 per cent of pharmaceutical companies are working on regenerative medicine therapies – an area described as a crossover between biology and engineering – and NUIG estimates that there are over 1,900 cell therapy clinical trials under way globally.

(Report taken from the Irish Times)

Radiological_evaluation_through_HRCT

Scientists in Trinity College Dublin have identified a new process that causes scarring in the lungs of patients with idiopathic pulmonary fibrosis (IPF). The research was led by Professor Padraic Fallon, School of Medicine, Trinity College Dublin and was an international collaboration with scientists from University College Dublin, MRC-LMB Cambridge, the University of Edinburgh, and the University of Erlangen. The study was published in the Proceedings of the National Academy of Sciences.

Pulmonary fibrosis arises as a result of excessive scarring (fibrosis) of the lung tissue and is associated with shortness of breath.  IPF is a progressive chronic condition for which there are very few effective therapies available and consequentially there is a poor prognosis.  Despite extensive investigation, the causes underlying IPF remain unknown although it has been linked with exposure to cigarette smoke and other environmental factors such as occupational exposure to gases, chemicals and dust.  It is hypothesized that chronic and repeated injury to lung cells, in particular alveolar epithelial cells, results in the release of pro-fibrotic factors such as transforming growth factor β (TGF β). These factors induce fibroblasts to release collagen that leads to scaring of the lungs tissue and thereby compromising the function of the lungs.

In this new study the authors have used animal models of lung fibrosis to show an increase in expression of a cytokine, interleukin-25 (IL-25), in the lungs with the development of pulmonary fibrosis being dependent on the presence of IL-25. In addition, a new role for a novel immune cell type, the type 2 innate lymphoid cell (ILC2) previously discovered by Professor Fallon and colleagues, in the initiation of fibrosis was described. It was also shown that the ILC2, induced by IL-25, cells themselves can induce collagen deposition in the lung via the release of pro-fibrotic factors such as IL-13.

To address the relevance of these findings to human disease a cohort of patients with pulmonary fibrosis were recruited from clinical collaborators Professor Seamas Donnelly (St Vincent’s Hospital and University College Dublin), Dr Nikhil Hirani (University of Edinburgh) and Dr Ruairi Fahy (St James’s Hospital).  Lung biopsies samples were recovered from patients at initial diagnosis and on follow-up visits to assess progression. High levels of IL-25 in the lungs of patients at initial IPF diagnosed were associated with disease progression.  Furthermore, a population of ILC2 was also present in the lungs of IPF patients but not control patients.

These discoveries open up a new perspective on how scarring develops in the lungs of people, as well as in other sites of the body, and further identifies potential avenues to develop therapies.

Professor Padraic Fallon, Science Foundation Ireland Stokes Professor of Translation Immunology who led the study commented: “We have highlighted in laboratory models and in patients how the immune system can malfunction to stimulate specific cytokines and novel cell types that can lead to tissue damage which, in the context of this study, can induce lung fibrosis. We are now addressing how we can reverse such tissue scarring and identify why there are differences in severity of pulmonary inflammation and fibrosis between patients with lung diseases, such as IPF and asthma.”

Professor Mark Ferguson, Director General, Science Foundation Ireland which funded the research jointly with the National Children’s Research Centre, and Chief Scientific Adviser to the Government of Ireland commented: “Pulmonary fibrosis is a devastating condition, with few treatment options. Professor Fallon’s research results provide a new understanding of the disease process and suggest new targets for future potential therapies – an example of excellent scientific research with potential future health and economic impacts.”

These studies may have broader implications to human disease. Professor Fallon and Wellcome Trust funded scientist Dr Sean Saunders in collaboration with Professor Graham Ogg (University of Oxford, UK) and Dr Andrew McKenzie (LMB Cambridge, UK) also just published this month in the leading medical peer-review journal The Journal of Experimental Medicine studies that implicate ILC2 and IL-25 in the development of atopic dermatitis (eczema) in patients.  The first author of the Proceedings of the National Academy of Sciences paper Dr Emily Hams from Trinity College Dublin has also recently implicated a function for these cellular responses in regulation of obesity. These new studies raise the potential for therapies targeting the initial responses that evoke aberrant inflammation that leads to a range of major human inflammatory diseases.

The research was funded by Science Foundation Ireland and the National Children’s Research Centre.

BDI

Arizona State University (ASU) and Dublin City University (DCU), Dublin, Ireland – are joining forces to create the new International School of Biomedical Diagnostics, which will offer the first degree program of its kind. The initiative is at the cutting edge of establishing diagnostics as an independent discipline.

Diagnostics are at the center of healthcare innovation today. They are involved in over 60 percent of clinical decision-making and the industry employs more than 3.5 million people worldwide. Diagnostics are critical to personalized medicine – the process of targeting drugs to those for whom they will be most effective.

The new school will draw from several assets of each institution. At DCU, the school will build upon the award-winning M.Sc. in Biomedical Diagnostics program based at the Biomedical Diagnostics Institute, and upon expertise from its faculties of Science and Health, Engineering and Computing, and DCU Business School.

“This school has been designed and implemented as a result of ASU’s partnerships with Dublin City University and Ventana Medical Systems,” said ASU President Michael Crow. “This is a tremendous example of how higher education is being transformed on a global basis through new technology-enabled collaborations. The school will have a huge impact on personalized medicine, as well as lowering health care costs and focusing on earlier disease detection and on wellness rather than illness.”

“This is an important and exciting development of global significance. The field of diagnostics is changing rapidly, and education programs must keep pace with developments,” said DCU President Brian MacCraith. “By combining the expertise and geographical context of ASU and DCU, and by collaborating with industry partners such as Ventana, we will be in a strong position to provide programs that are always at the cutting edge.”

For more, click here

young scientist 2014

A Dublin student who found answers to previously unsolved mathematical problems has won the 50th BT Young Scientist and Technology Exhibition at the RDS. Paul Clarke undertook months of research into complex mathematical theory to become the young scientist of the year.

Paul Clarke of St Paul’s College in Raheny, Dublin wanted to do something new, solve mathematical problems linked to a concept known as cyclic graph theory. “I am looking at a number of unsolved problems in graph theory,” the 17-year-old fifth year explained. Graph theory provides a mathematical way to look at structured data, structured in the way data points are captured in a graph.

While graph theory is difficult it is extremely useful in a number of ways, Paul explained. It helps computers build complex models of experimental drugs or proteins, and can be used to solve puzzles like the “travelling salesman” that optimises the route that should be taken to visit a number of points in the least possible distance.

“It was demanding and needed dedication and motivation,” he acknowledged. For example he might pursue a possible answer but discover a month on that it would not work, particularly because the problems were “unsolved and hard”.

Paul received the BT Young Scientist of 2014 perpetual trophy, a cheque for €5,000 and the chance to represent Ireland at the European Union Contest for Young Scientists.

To find out about the other winners and more on the Exhibition, check out www.btyoungscientist.ie

BTYSTE 50th

In 1963 two physics researchers from the University College Dublin, Rev. Dr. Tom Burke and Dr. Tony Scott, came across the concept of ‘Science Fairs’ while conducting research in New Mexico, America. The pair decided that this type of hands-on science was something that students in Ireland could benefit from. And so the Young Scientist Exhibition was born.

Now in it’s 50th year, registration for the 2014 exhibition kicked off this afternoon and the winners will be announced in the RDS on Friday 10th January. Projects this year include a study into how our changing laundry habits could be causing E.coli infection, the development of “Moo Boots” to help heal bacterial infections that cause foot rot in cattle, and an investigation into how the principles of Lego building blocks might be able to help people trapped in crisis zones after an earthquake!

In series one of The Science Squad, we tracked down 3 former participants to find out what kind of impact the event has had on their careers, and met one former winner who’s now working on the greatest physics experiment the world has ever known! Check it out by clicking here

And for more on the BTYSTE check out www.btyoungscientist.ie